ULBP1
UL16 binding protein 1 | RAET1I

The protein encoded by this gene is a ligand of natural killer group 2, member D (NKG2D), an immune system-activating receptor on NK cells and T-cells. Binding of the encoded ligand to NKG2D leads to activation of several signal transduction pathways, including those of JAK2, STAT5, ERK and PI3K kinase/Akt. Also, in cytomegalovirus-infected cells, this ligand binds the UL16 glycoprotein and is prevented from activating the immune system. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015]

Developmental clusters: GC3
Biological processes 18 terms
Expression (TPM)
ULBP1 — as a Regulated Gene

TFs regulating ULBP1 0 TFs

Transcription factors with Perturb-seq knockdown data for ULBP1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ULBP1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ULBP1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ULBP1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr6:149,963,109–149,964,540 at TSS At TSS 691

Genome Browser

Genomic view of the ULBP1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr6:149,953,109 – 149,974,540
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq