TMEM241
solute carrier family 35 member D4 | FLJ44259, MGC11386, C18orf45, TMEM241
Expression (TPM)
TMEM241 — as a Regulated Gene

TFs regulating TMEM241 0 TFs

Transcription factors with Perturb-seq knockdown data for TMEM241. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = TMEM241 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to TMEM241

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of TMEM241, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr18:23,133,973–23,134,655 303.6 kb Distal (>10kb) Multiome HiCAR 505
chr18:23,134,786–23,136,684 302.3 kb Distal (>10kb) Multiome HiCAR 757
chr18:23,259,654–23,260,831 177.7 kb Distal (>10kb) Multiome 655
chr18:23,437,346–23,438,074 54 bp At TSS Multiome 628
chr18:23,452,793–23,453,775 15.3 kb Distal (>10kb) Multiome 796
chr18:23,502,975–23,503,998 65.5 kb Distal (>10kb) Multiome 907
chr18:23,586,020–23,587,174 148.8 kb Distal (>10kb) Multiome 908
chr18:23,609,370–23,609,991 171.8 kb Distal (>10kb) Multiome 79
chr18:23,618,918–23,619,643 181.4 kb Distal (>10kb) Multiome 295
chr18:23,662,307–23,663,058 224.8 kb Distal (>10kb) Multiome 349
chr18:23,689,205–23,690,311 251.6 kb Distal (>10kb) Multiome 469
chr18:23,721,611–23,722,408 284.1 kb Distal (>10kb) Multiome 82

Genome Browser

Genomic view of the TMEM241 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr18:23,123,973 – 23,732,408
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq