This gene encodes a member of the mitochondrial carrier family of proteins.[provided by RefSeq, Dec 2009]
Transcription factors with Perturb-seq knockdown data for SLC25A43. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = SLC25A43 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of SLC25A43, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chrX:119,235,776–119,237,022 | 163.1 kb | Distal (>10kb) Multiome | 578 | |
| chrX:119,273,185–119,274,073 | 125.6 kb | Distal (>10kb) Multiome | 148 | |
| chrX:119,399,020–119,399,773 | 97 bp | At TSS Multiome | 440 | |
| chrX:119,468,031–119,469,511 | 69.0 kb | Distal (>10kb) Multiome | 762 | |
| chrX:119,573,862–119,575,243 | 175.2 kb | Distal (>10kb) Multiome | 734 | |
| chrX:119,605,775–119,606,635 | 207.1 kb | Distal (>10kb) Multiome | 518 | |
| chrX:119,692,568–119,693,792 | 294.0 kb | Distal (>10kb) Multiome | 595 |
Genomic view of the SLC25A43 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.