PPL
periplakin

The protein encoded by this gene is a component of desmosomes and of the epidermal cornified envelope in keratinocytes. The N-terminal domain of this protein interacts with the plasma membrane and its C-terminus interacts with intermediate filaments. Through its rod domain, this protein forms complexes with envoplakin. This protein may serve as a link between the cornified envelope and desmosomes as well as intermediate filaments. AKT1/PKB, a protein kinase mediating a variety of cell growth and survival signaling processes, is reported to interact with this protein, suggesting a possible role for this protein as a localization signal in AKT1-mediated signaling. [provided by RefSeq, Jul 2008]

Member of: DE-5 DE-5.10 Developmental clusters: GC7
Biological processes 23 terms
Expression (TPM)
PPL — as a Regulated Gene

TFs regulating PPL 0 TFs

Transcription factors with Perturb-seq knockdown data for PPL. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = PPL upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to PPL

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of PPL, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr16:4,693,016–4,694,663 243.5 kb Distal (>10kb) Multiome 730
chr16:4,733,836–4,735,221 202.7 kb Distal (>10kb) Multiome 858
chr16:4,766,728–4,767,628 169.9 kb Distal (>10kb) Multiome 795
chr16:4,768,438–4,769,162 168.3 kb Distal (>10kb) Multiome 677
chr16:4,801,836–4,803,175 134.8 kb Distal (>10kb) Multiome 743
chr16:4,846,559–4,848,209 89.7 kb Distal (>10kb) Multiome 803
chr16:4,936,143–4,937,673 142 bp At TSS Multiome 655
chr16:4,943,173–4,943,813 6.3 kb Proximal (<10kb) Multiome 609
chr16:4,957,489–4,958,782 21.0 kb Distal (>10kb) Multiome 802
chr16:5,010,592–5,011,132 73.7 kb Distal (>10kb) Multiome 136
chr16:5,033,461–5,034,081 96.7 kb Distal (>10kb) Multiome 932
chr16:5,071,693–5,072,259 134.8 kb Distal (>10kb) Multiome 940
chr16:5,097,069–5,098,979 160.9 kb Distal (>10kb) Multiome 638
chr16:5,213,262–5,213,748 276.3 kb Distal (>10kb) Multiome 34

Genome Browser

Genomic view of the PPL locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr16:4,683,016 – 5,223,748
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq