POLR1G
RNA polymerase I subunit G | A34.5, ASE-1, CAST, PAF49, RPA34, CD3EAP
POLR1G — as a Regulated Gene

TFs regulating POLR1G 0 TFs

Transcription factors with Perturb-seq knockdown data for POLR1G. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = POLR1G upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to POLR1G

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of POLR1G, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr19:45,177,803–45,179,711 228.2 kb Distal (>10kb) Multiome 899
chr19:45,234,200–45,234,822 172.1 kb Distal (>10kb) Multiome 105
chr19:45,250,821–45,251,491 155.4 kb Distal (>10kb) Multiome 397
chr19:45,340,431–45,341,201 65.8 kb Distal (>10kb) Multiome 363
chr19:45,370,064–45,371,122 36.0 kb Distal (>10kb) Multiome 592
chr19:45,398,068–45,398,489 8.2 kb Proximal (<10kb) 281
chr19:45,402,280–45,402,828 4.1 kb Proximal (<10kb) Multiome 332
chr19:45,403,781–45,404,684 2.6 kb Proximal (<10kb) Multiome 494
chr19:45,404,818–45,406,887 141 bp At TSS Multiome 964
chr19:45,423,326–45,424,545 17.1 kb Distal (>10kb) Multiome 996
chr19:45,439,539–45,440,189 33.2 kb Distal (>10kb) Multiome 718
chr19:45,443,052–45,444,768 36.8 kb Distal (>10kb) Multiome 857
chr19:45,450,695–45,451,265 44.2 kb Distal (>10kb) Multiome 515
chr19:45,455,706–45,456,201 49.3 kb Distal (>10kb) Multiome 776
chr19:45,467,169–45,468,696 61.1 kb Distal (>10kb) Multiome 686
chr19:45,468,843–45,470,312 62.8 kb Distal (>10kb) Multiome 769
chr19:45,478,416–45,479,276 72.2 kb Distal (>10kb) Multiome 809
chr19:45,485,144–45,486,070 78.9 kb Distal (>10kb) Multiome HiCAR 659
chr19:45,492,647–45,493,344 86.2 kb Distal (>10kb) Multiome 522
chr19:45,496,247–45,497,677 90.4 kb Distal (>10kb) Multiome 742
chr19:45,498,270–45,499,916 92.9 kb Distal (>10kb) Multiome 464
chr19:45,506,243–45,507,963 100.1 kb Distal (>10kb) Multiome 969
chr19:45,508,291–45,509,751 102.0 kb Distal (>10kb) Multiome 670
chr19:45,528,315–45,529,353 122.2 kb Distal (>10kb) Multiome 425
chr19:45,584,026–45,585,251 178.0 kb Distal (>10kb) Multiome 907
chr19:45,607,096–45,607,695 200.8 kb Distal (>10kb) Multiome 526
chr19:45,615,654–45,616,944 209.5 kb Distal (>10kb) Multiome 480
chr19:45,632,406–45,633,148 226.1 kb Distal (>10kb) Multiome 358
chr19:45,638,965–45,639,696 232.7 kb Distal (>10kb) Multiome 477
chr19:45,640,813–45,642,557 235.6 kb Distal (>10kb) Multiome 865
chr19:45,643,187–45,644,012 237.0 kb Distal (>10kb) Multiome 542
chr19:45,645,389–45,646,343 239.3 kb Distal (>10kb) Multiome 566
chr19:45,667,856–45,668,417 261.4 kb Distal (>10kb) Multiome 386
chr19:45,668,914–45,669,719 262.7 kb Distal (>10kb) Multiome 611
chr19:45,670,481–45,671,446 264.4 kb Distal (>10kb) Multiome 361
chr19:45,676,875–45,678,209 270.9 kb Distal (>10kb) Multiome 418
chr19:45,681,530–45,682,004 275.1 kb Distal (>10kb) Multiome 648
chr19:45,691,622–45,693,062 285.7 kb Distal (>10kb) Multiome 943

Genome Browser

Genomic view of the POLR1G locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr19:45,167,803 – 45,703,062
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq