POLI
DNA polymerase iota | RAD30B, RAD3OB

The protein encoded by this gene is an error-prone DNA polymerase involved in DNA repair. The encoded protein promotes DNA synthesis across lesions in the template DNA, which other polymerases cannot do. The encoded polymerase inserts deoxynucleotides across lesions and then relies on DNA polymerase zeta to extend the nascent DNA strand to bypass the lesion. [provided by RefSeq, May 2017]

Member of: DE-2 Developmental clusters: GC7
Biological processes 16 terms
Expression (TPM)
POLI — as a Regulated Gene

TFs regulating POLI 0 TFs

Transcription factors with Perturb-seq knockdown data for POLI. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = POLI upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to POLI

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of POLI, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr18:54,223,556–54,225,199 44.9 kb Distal (>10kb) Multiome 810
chr18:54,235,612–54,236,484 33.5 kb Distal (>10kb) Multiome 178
chr18:54,246,611–54,248,045 22.3 kb Distal (>10kb) Multiome 501
chr18:54,268,849–54,270,571 92 bp At TSS Multiome 936
chr18:54,357,058–54,358,694 88.3 kb Distal (>10kb) Multiome 739
chr18:54,480,384–54,481,350 211.3 kb Distal (>10kb) Multiome 108
chr18:54,528,914–54,529,969 259.9 kb Distal (>10kb) Multiome 181
chr18:54,531,114–54,532,495 262.0 kb Distal (>10kb) Multiome 125

Genome Browser

Genomic view of the POLI locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr18:54,213,556 – 54,542,495
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq