PLEKHA2
pleckstrin homology domain containing A2 | TAPP2
PLEKHA2 — as a Regulated Gene

TFs regulating PLEKHA2 0 TFs

Transcription factors with Perturb-seq knockdown data for PLEKHA2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = PLEKHA2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to PLEKHA2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of PLEKHA2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr8:38,734,447–38,735,152 167.0 kb Distal (>10kb) Multiome 738
chr8:38,756,730–38,757,722 144.7 kb Distal (>10kb) Multiome 535
chr8:38,786,808–38,788,320 114.6 kb Distal (>10kb) Multiome 620
chr8:38,899,958–38,902,158 499 bp At TSS Multiome 565
chr8:38,973,978–38,975,173 72.8 kb Distal (>10kb) Multiome 205
chr8:38,995,870–38,997,751 94.9 kb Distal (>10kb) Multiome 913

Genome Browser

Genomic view of the PLEKHA2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr8:38,724,447 – 39,007,751
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq