NOSIP
nitric oxide synthase interacting protein | CGI-25
NOSIP — as a Regulated Gene

TFs regulating NOSIP 0 TFs

Transcription factors with Perturb-seq knockdown data for NOSIP. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = NOSIP upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to NOSIP

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of NOSIP, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr19:49,337,997–49,340,482 241.3 kb Distal (>10kb) Multiome 612
chr19:49,361,283–49,362,837 219.0 kb Distal (>10kb) Multiome 553
chr19:49,362,970–49,364,306 216.9 kb Distal (>10kb) Multiome 616
chr19:49,403,611–49,404,247 176.6 kb Distal (>10kb) Multiome 305
chr19:49,432,343–49,432,785 148.0 kb Distal (>10kb) Multiome 103
chr19:49,436,149–49,436,821 144.1 kb Distal (>10kb) Multiome 248
chr19:49,441,067–49,441,861 139.0 kb Distal (>10kb) Multiome 223
chr19:49,442,072–49,444,054 137.6 kb Distal (>10kb) Multiome 914
chr19:49,451,347–49,452,239 128.7 kb Distal (>10kb) Multiome 764
chr19:49,452,723–49,453,850 127.2 kb Distal (>10kb) Multiome 847
chr19:49,476,063–49,476,551 104.2 kb Distal (>10kb) Multiome 244
chr19:49,487,027–49,488,279 93.1 kb Distal (>10kb) Multiome 964
chr19:49,495,613–49,496,661 84.3 kb Distal (>10kb) Multiome 919
chr19:49,500,403–49,501,353 79.8 kb Distal (>10kb) Multiome 405
chr19:49,512,565–49,513,700 67.5 kb Distal (>10kb) Multiome 655
chr19:49,527,651–49,528,221 52.6 kb Distal (>10kb) Multiome 354
chr19:49,533,232–49,534,476 46.5 kb Distal (>10kb) Multiome 534
chr19:49,555,629–49,557,180 24.4 kb Distal (>10kb) Multiome 294
chr19:49,580,125–49,580,813 54 bp At TSS Multiome 848
chr19:49,589,601–49,594,008 13.0 kb Distal (>10kb) Multiome 994
chr19:49,638,063–49,638,728 57.7 kb Distal (>10kb) Multiome 237
chr19:49,639,671–49,642,787 59.9 kb Distal (>10kb) Multiome 1067
chr19:49,664,165–49,665,096 84.0 kb Distal (>10kb) Multiome 679
chr19:49,665,345–49,666,430 85.4 kb Distal (>10kb) Multiome 721
chr19:49,672,105–49,672,787 91.8 kb Distal (>10kb) Multiome 625
chr19:49,676,058–49,678,754 96.4 kb Distal (>10kb) Multiome 1033
chr19:49,680,433–49,681,147 100.2 kb Distal (>10kb) Multiome 435
chr19:49,690,485–49,691,761 110.6 kb Distal (>10kb) Multiome 327
chr19:49,746,188–49,746,748 165.9 kb Distal (>10kb) Multiome 283
chr19:49,766,231–49,767,440 186.1 kb Distal (>10kb) Multiome 718
chr19:49,802,146–49,802,787 221.9 kb Distal (>10kb) Multiome 200
chr19:49,805,226–49,805,871 225.0 kb Distal (>10kb) Multiome 245
chr19:49,808,201–49,809,746 228.4 kb Distal (>10kb) Multiome 509
chr19:49,812,926–49,813,834 232.9 kb Distal (>10kb) Multiome 650
chr19:49,817,356–49,818,721 237.7 kb Distal (>10kb) Multiome 784
chr19:49,850,394–49,852,067 270.3 kb Distal (>10kb) Multiome 862
chr19:49,866,817–49,868,124 286.8 kb Distal (>10kb) Multiome 874
chr19:49,869,068–49,870,398 289.1 kb Distal (>10kb) Multiome 832
chr19:49,875,842–49,878,576 297.2 kb Distal (>10kb) Multiome 1153

Genome Browser

Genomic view of the NOSIP locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr19:49,327,997 – 49,888,576
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq