NMRK2
nicotinamide riboside kinase 2 | MIBP, NRK2, ITGB1BP3
Expression (TPM)
NMRK2 — as a Regulated Gene

TFs regulating NMRK2 0 TFs

Transcription factors with Perturb-seq knockdown data for NMRK2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = NMRK2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to NMRK2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of NMRK2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr19:3,699,968–3,700,899 232.5 kb Distal (>10kb) Multiome 489
chr19:3,721,462–3,721,997 211.4 kb Distal (>10kb) Multiome 760
chr19:3,722,652–3,723,093 210.1 kb Distal (>10kb) Multiome 106
chr19:3,761,103–3,762,150 171.4 kb Distal (>10kb) Multiome 839
chr19:3,762,300–3,763,344 170.1 kb Distal (>10kb) Multiome 817
chr19:3,868,451–3,869,181 63.9 kb Distal (>10kb) Multiome 233
chr19:3,932,937–3,933,664 209 bp At TSS Multiome 198
chr19:3,968,623–3,969,280 35.8 kb Distal (>10kb) Multiome 547
chr19:3,970,535–3,971,713 38.2 kb Distal (>10kb) Multiome 728
chr19:3,985,032–3,985,862 52.4 kb Distal (>10kb) Multiome 932
chr19:4,006,992–4,008,553 74.5 kb Distal (>10kb) Multiome 888
chr19:4,064,058–4,067,782 132.9 kb Distal (>10kb) Multiome 811
chr19:4,123,681–4,124,581 191.1 kb Distal (>10kb) Multiome 798
chr19:4,182,102–4,182,890 249.5 kb Distal (>10kb) Multiome 862
chr19:4,198,066–4,198,600 265.3 kb Distal (>10kb) Multiome 214

Genome Browser

Genomic view of the NMRK2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr19:3,689,968 – 4,208,600
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq