MRPS7
mitochondrial ribosomal protein S7 | MRP-S, RP-S7, RPMS7, uS7m

Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein. In the prokaryotic ribosome, the comparable protein is thought to play an essential role in organizing the 3' domain of the 16 S rRNA in the vicinity of the P- and A-sites. Pseudogenes corresponding to this gene are found on chromosomes 8p and 12p. [provided by RefSeq, Jul 2008]

Member of: DE-1
Biological processes 19 terms
Expression (TPM)
MRPS7 — as a Regulated Gene

TFs regulating MRPS7 0 TFs

Transcription factors with Perturb-seq knockdown data for MRPS7. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = MRPS7 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to MRPS7

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of MRPS7, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr17:74,972,019–74,973,116 289.1 kb Distal (>10kb) Multiome 607
chr17:74,982,006–74,982,936 279.5 kb Distal (>10kb) Multiome 952
chr17:74,987,081–74,988,770 274.3 kb Distal (>10kb) Multiome 702
chr17:75,012,158–75,013,285 249.1 kb Distal (>10kb) Multiome 1058
chr17:75,033,550–75,035,757 226.8 kb Distal (>10kb) Multiome 1228
chr17:75,046,451–75,047,855 214.8 kb Distal (>10kb) Multiome 961
chr17:75,087,344–75,088,429 174.1 kb Distal (>10kb) Multiome 717
chr17:75,089,013–75,089,866 172.5 kb Distal (>10kb) Multiome 406
chr17:75,104,838–75,106,094 156.1 kb Distal (>10kb) Multiome 454
chr17:75,109,401–75,110,734 152.0 kb Distal (>10kb) Multiome 762
chr17:75,113,757–75,114,535 147.7 kb Distal (>10kb) Multiome 585
chr17:75,130,577–75,132,090 130.2 kb Distal (>10kb) Multiome 990
chr17:75,153,354–75,155,273 107.3 kb Distal (>10kb) Multiome 993
chr17:75,182,199–75,183,441 78.9 kb Distal (>10kb) Multiome 908
chr17:75,205,060–75,205,995 56.4 kb Distal (>10kb) Multiome 975
chr17:75,240,373–75,240,941 21.2 kb Distal (>10kb) Multiome 436
chr17:75,254,189–75,254,403 7.3 kb Proximal (<10kb) 2
chr17:75,261,304–75,262,404 160 bp At TSS Multiome 983
chr17:75,267,687–75,267,942 6.0 kb Proximal (<10kb) 516
chr17:75,270,231–75,271,942 9.4 kb Proximal (<10kb) Multiome 946
chr17:75,288,761–75,289,874 27.6 kb Distal (>10kb) Multiome 941
chr17:75,346,809–75,347,324 85.3 kb Distal (>10kb) Multiome 265
chr17:75,393,479–75,394,300 132.0 kb Distal (>10kb) Multiome HiCAR 834
chr17:75,404,856–75,406,161 143.9 kb Distal (>10kb) Multiome HiCAR 917
chr17:75,456,149–75,457,264 194.7 kb Distal (>10kb) Multiome 865
chr17:75,481,081–75,481,680 219.5 kb Distal (>10kb) Multiome 64
chr17:75,514,425–75,517,171 253.8 kb Distal (>10kb) Multiome 1158
chr17:75,524,764–75,527,160 263.6 kb Distal (>10kb) Multiome 951
chr17:75,549,465–75,550,388 288.1 kb Distal (>10kb) Multiome 602

Genome Browser

Genomic view of the MRPS7 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr17:74,962,019 – 75,560,388
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq