Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein. In the prokaryotic ribosome, the comparable protein is thought to play an essential role in organizing the 3' domain of the 16 S rRNA in the vicinity of the P- and A-sites. Pseudogenes corresponding to this gene are found on chromosomes 8p and 12p. [provided by RefSeq, Jul 2008]
Transcription factors with Perturb-seq knockdown data for MRPS7. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = MRPS7 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of MRPS7, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr17:74,972,019–74,973,116 | 289.1 kb | Distal (>10kb) Multiome | 607 | |
| chr17:74,982,006–74,982,936 | 279.5 kb | Distal (>10kb) Multiome | 952 | |
| chr17:74,987,081–74,988,770 | 274.3 kb | Distal (>10kb) Multiome | 702 | |
| chr17:75,012,158–75,013,285 | 249.1 kb | Distal (>10kb) Multiome | 1058 | |
| chr17:75,033,550–75,035,757 | 226.8 kb | Distal (>10kb) Multiome | 1228 | |
| chr17:75,046,451–75,047,855 | 214.8 kb | Distal (>10kb) Multiome | 961 | |
| chr17:75,087,344–75,088,429 | 174.1 kb | Distal (>10kb) Multiome | 717 | |
| chr17:75,089,013–75,089,866 | 172.5 kb | Distal (>10kb) Multiome | 406 | |
| chr17:75,104,838–75,106,094 | 156.1 kb | Distal (>10kb) Multiome | 454 | |
| chr17:75,109,401–75,110,734 | 152.0 kb | Distal (>10kb) Multiome | 762 | |
| chr17:75,113,757–75,114,535 | 147.7 kb | Distal (>10kb) Multiome | 585 | |
| chr17:75,130,577–75,132,090 | 130.2 kb | Distal (>10kb) Multiome | 990 | |
| chr17:75,153,354–75,155,273 | 107.3 kb | Distal (>10kb) Multiome | 993 | |
| chr17:75,182,199–75,183,441 | 78.9 kb | Distal (>10kb) Multiome | 908 | |
| chr17:75,205,060–75,205,995 | 56.4 kb | Distal (>10kb) Multiome | 975 | |
| chr17:75,240,373–75,240,941 | 21.2 kb | Distal (>10kb) Multiome | 436 | |
| chr17:75,254,189–75,254,403 | 7.3 kb | Proximal (<10kb) | 2 | |
| chr17:75,261,304–75,262,404 | 160 bp | At TSS Multiome | 983 | |
| chr17:75,267,687–75,267,942 | 6.0 kb | Proximal (<10kb) | 516 | |
| chr17:75,270,231–75,271,942 | 9.4 kb | Proximal (<10kb) Multiome | 946 | |
| chr17:75,288,761–75,289,874 | 27.6 kb | Distal (>10kb) Multiome | 941 | |
| chr17:75,346,809–75,347,324 | 85.3 kb | Distal (>10kb) Multiome | 265 | |
| chr17:75,393,479–75,394,300 | 132.0 kb | Distal (>10kb) Multiome HiCAR | 834 | |
| chr17:75,404,856–75,406,161 | 143.9 kb | Distal (>10kb) Multiome HiCAR | 917 | |
| chr17:75,456,149–75,457,264 | 194.7 kb | Distal (>10kb) Multiome | 865 | |
| chr17:75,481,081–75,481,680 | 219.5 kb | Distal (>10kb) Multiome | 64 | |
| chr17:75,514,425–75,517,171 | 253.8 kb | Distal (>10kb) Multiome | 1158 | |
| chr17:75,524,764–75,527,160 | 263.6 kb | Distal (>10kb) Multiome | 951 | |
| chr17:75,549,465–75,550,388 | 288.1 kb | Distal (>10kb) Multiome | 602 |
Genomic view of the MRPS7 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.