HPRT1
hypoxanthine phosphoribosyltransferase 1 | HGPRT, HPRT

The protein encoded by this gene is a transferase, which catalyzes conversion of hypoxanthine to inosine monophosphate and guanine to guanosine monophosphate via transfer of the 5-phosphoribosyl group from 5-phosphoribosyl 1-pyrophosphate. This enzyme plays a central role in the generation of purine nucleotides through the purine salvage pathway. Mutations in this gene result in Lesch-Nyhan syndrome or gout.[provided by RefSeq, Jun 2009]

Member of: DE-6 Developmental clusters: GC4
Biological processes 36 terms
Expression (TPM)
HPRT1 — as a Regulated Gene

TFs regulating HPRT1 0 TFs

Transcription factors with Perturb-seq knockdown data for HPRT1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = HPRT1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to HPRT1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of HPRT1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chrX:134,236,856–134,237,491 223.0 kb Distal (>10kb) Multiome 162
chrX:134,372,941–134,373,690 86.9 kb Distal (>10kb) Multiome 522
chrX:134,459,786–134,460,688 4 bp At TSS Multiome 477
chrX:134,549,302–134,550,043 89.5 kb Distal (>10kb) Multiome 507

Genome Browser

Genomic view of the HPRT1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chrX:134,226,856 – 134,560,043
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq