GRPEL1
GrpE like 1, mitochondrial | FLJ25609, GrpE, hMGE
GRPEL1 — as a Regulated Gene

TFs regulating GRPEL1 0 TFs

Transcription factors with Perturb-seq knockdown data for GRPEL1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = GRPEL1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to GRPEL1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of GRPEL1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr4:6,709,388–6,710,099 358.2 kb Distal (>10kb) Multiome HiCAR 693
chr4:6,715,775–6,716,910 351.9 kb Distal (>10kb) Multiome HiCAR 822
chr4:6,782,106–6,784,027 285.5 kb Distal (>10kb) Multiome 886
chr4:6,908,950–6,910,715 158.5 kb Distal (>10kb) Multiome HiCAR 820
chr4:6,986,472–6,987,825 80.9 kb Distal (>10kb) Multiome 762
chr4:7,007,023–7,007,815 60.7 kb Distal (>10kb) Multiome 59
chr4:7,042,101–7,044,552 24.9 kb Distal (>10kb) Multiome 741
chr4:7,067,444–7,068,837 138 bp At TSS Multiome 887
chr4:7,068,957–7,069,227 872 bp At TSS 138
chr4:7,070,781–7,071,083 2.7 kb Proximal (<10kb) 369
chr4:7,101,878–7,102,488 34.0 kb Distal (>10kb) Multiome 437
chr4:7,102,990–7,103,713 35.4 kb Distal (>10kb) Multiome 565
chr4:7,192,144–7,193,135 124.4 kb Distal (>10kb) Multiome 236

Genome Browser

Genomic view of the GRPEL1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr4:6,699,388 – 7,203,135
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq