GPR89B
golgi pH regulator B | GPHRB, SH120, GPR89, GPR89B, GPR89C, LINC02804

Enables voltage-gated monoatomic anion channel activity. Involved in intracellular pH reduction. Located in Golgi cisterna membrane and Golgi-associated vesicle membrane. [provided by Alliance of Genome Resources, Jul 2025]

Member of: DE-5
Biological processes 9 terms
Expression (TPM)
GPR89B — as a Regulated Gene

TFs regulating GPR89B 0 TFs

Transcription factors with Perturb-seq knockdown data for GPR89B. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = GPR89B upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to GPR89B

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of GPR89B, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr1:147,669,496–147,671,101 257.9 kb Distal (>10kb) Multiome 793
chr1:147,820,658–147,821,597 107.3 kb Distal (>10kb) Multiome 92
chr1:147,833,206–147,834,500 94.3 kb Distal (>10kb) Multiome 152
chr1:147,928,204–147,928,767 12 bp At TSS Multiome 240
chr1:148,038,392–148,038,981 110.3 kb Distal (>10kb) Multiome 522
chr1:148,263,120–148,264,484 335.2 kb Distal (>10kb) Multiome HiCAR 872

Genome Browser

Genomic view of the GPR89B locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr1:147,659,496 – 148,274,484
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq