Predicted to enable calcium ion binding activity. Predicted to be involved in regulation of neurotransmitter secretion. Predicted to be located in plasma membrane. Predicted to be active in synaptic vesicle membrane. [provided by Alliance of Genome Resources, Jul 2025]
Transcription factors with Perturb-seq knockdown data for FER1L5. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = FER1L5 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of FER1L5, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr2:96,507,900–96,508,563 | 134.6 kb | Distal (>10kb) Multiome | 466 | |
| chr2:96,509,253–96,509,998 | 133.1 kb | Distal (>10kb) Multiome | 525 | |
| chr2:96,531,989–96,532,491 | 110.5 kb | Distal (>10kb) Multiome | 500 | |
| chr2:96,536,180–96,538,128 | 106.1 kb | Distal (>10kb) Multiome | 684 | |
| chr2:96,538,413–96,539,012 | 104.0 kb | Distal (>10kb) Multiome | 371 | |
| chr2:96,554,285–96,554,861 | 88.2 kb | Distal (>10kb) Multiome | 435 | |
| chr2:96,637,810–96,638,901 | 4.5 kb | Proximal (<10kb) Multiome | 1144 | |
| chr2:96,642,571–96,642,984 | at TSS | At TSS | 100 | |
| chr2:96,739,549–96,740,363 | 97.3 kb | Distal (>10kb) Multiome | 708 | |
| chr2:96,760,354–96,761,531 | 118.1 kb | Distal (>10kb) Multiome | 776 | |
| chr2:96,762,598–96,764,653 | 120.3 kb | Distal (>10kb) Multiome | 406 | |
| chr2:96,815,434–96,817,859 | 173.5 kb | Distal (>10kb) Multiome | 926 | |
| chr2:96,857,099–96,859,416 | 215.4 kb | Distal (>10kb) Multiome | 1033 | |
| chr2:96,868,320–96,870,552 | 227.4 kb | Distal (>10kb) Multiome | 907 | |
| chr2:96,881,325–96,881,826 | 238.9 kb | Distal (>10kb) Multiome | 188 |
Genomic view of the FER1L5 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.