FAM83B
scaffolding CK1 anchoring protein B | FLJ30642, C6orf143, FAM83B
FAM83B — as a Regulated Gene

TFs regulating FAM83B 0 TFs

Transcription factors with Perturb-seq knockdown data for FAM83B. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = FAM83B upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to FAM83B

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of FAM83B, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr6:54,845,956–54,847,833 114 bp At TSS Multiome 467
chr6:55,046,511–55,047,434 200.3 kb Distal (>10kb) Multiome 155

Genome Browser

Genomic view of the FAM83B locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr6:54,835,956 – 55,057,434
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq