F10
coagulation factor X | fX

This gene encodes the vitamin K-dependent coagulation factor X of the blood coagulation cascade. This factor undergoes multiple processing steps before its preproprotein is converted to a mature two-chain form by the excision of the tripeptide RKR. Two chains of the factor are held together by 1 or more disulfide bonds; the light chain contains 2 EGF-like domains, while the heavy chain contains the catalytic domain which is structurally homologous to those of the other hemostatic serine proteases. The mature factor is activated by the cleavage of the activation peptide by factor IXa (in the intrisic pathway), or by factor VIIa (in the extrinsic pathway). The activated factor then converts prothrombin to thrombin in the presence of factor Va, Ca+2, and phospholipid during blood clotting. Mutations of this gene result in factor X deficiency, a hemorrhagic condition of variable severity. Alternative splicing results in multiple transcript variants encoding different isoforms that may undergo similar proteolytic processing to generate mature polypeptides. [provided by RefSeq, Aug 2015]

Developmental clusters: GC7
Biological processes 31 terms
Expression (TPM)
F10 — as a Regulated Gene

TFs regulating F10 0 TFs

Transcription factors with Perturb-seq knockdown data for F10. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = F10 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to F10

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of F10, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr13:112,885,816–112,886,312 236.8 kb Distal (>10kb) Multiome 440
chr13:112,893,373–112,895,600 228.6 kb Distal (>10kb) Multiome 634
chr13:112,906,009–112,906,659 216.5 kb Distal (>10kb) Multiome 327
chr13:112,942,743–112,944,278 179.9 kb Distal (>10kb) Multiome 632
chr13:112,968,613–112,969,532 153.7 kb Distal (>10kb) Multiome 497
chr13:113,022,696–113,023,521 99.7 kb Distal (>10kb) Multiome 461
chr13:113,122,610–113,123,071 at TSS At TSS 519
chr13:113,179,328–113,180,131 56.8 kb Distal (>10kb) Multiome 164
chr13:113,208,078–113,210,214 86.1 kb Distal (>10kb) Multiome 1103
chr13:113,296,598–113,297,816 174.3 kb Distal (>10kb) Multiome 1104
chr13:113,393,735–113,394,451 271.3 kb Distal (>10kb) Multiome 576
chr13:113,397,604–113,398,329 275.1 kb Distal (>10kb) Multiome 76

Genome Browser

Genomic view of the F10 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr13:112,875,816 – 113,408,329
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq