ETAA1
ETAA1 activator of ATR kinase | ETAA16
ETAA1 — as a Regulated Gene

TFs regulating ETAA1 0 TFs

Transcription factors with Perturb-seq knockdown data for ETAA1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ETAA1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ETAA1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ETAA1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr2:67,215,000–67,215,926 181.9 kb Distal (>10kb) Multiome 237
chr2:67,216,567–67,217,220 180.3 kb Distal (>10kb) Multiome 135
chr2:67,397,100–67,398,169 18 bp At TSS Multiome 810
chr2:67,548,235–67,549,297 151.3 kb Distal (>10kb) Multiome 152

Genome Browser

Genomic view of the ETAA1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr2:67,205,000 – 67,559,297
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq