ESYT1
extended synaptotagmin 1 | KIAA0747, MBC2, FAM62A
ESYT1 — as a Regulated Gene

TFs regulating ESYT1 0 TFs

Transcription factors with Perturb-seq knockdown data for ESYT1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ESYT1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ESYT1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ESYT1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr12:55,829,008–55,831,505 298.6 kb Distal (>10kb) Multiome 921
chr12:55,926,651–55,928,471 201.3 kb Distal (>10kb) Multiome 993
chr12:55,931,904–55,932,439 196.1 kb Distal (>10kb) Multiome 279
chr12:55,940,073–55,940,746 187.8 kb Distal (>10kb) Multiome 478
chr12:55,966,006–55,967,470 161.5 kb Distal (>10kb) Multiome 615
chr12:55,973,347–55,974,716 154.4 kb Distal (>10kb) Multiome 966
chr12:55,996,814–55,997,861 131.0 kb Distal (>10kb) Multiome 680
chr12:56,006,888–56,008,461 120.6 kb Distal (>10kb) Multiome 745
chr12:56,020,644–56,021,511 107.3 kb Distal (>10kb) Multiome 364
chr12:56,041,220–56,042,537 86.5 kb Distal (>10kb) Multiome 1035
chr12:56,078,964–56,081,015 49.0 kb Distal (>10kb) Multiome 1032
chr12:56,103,918–56,105,302 23.9 kb Distal (>10kb) Multiome 977
chr12:56,115,844–56,117,060 11.7 kb Distal (>10kb) Multiome 958
chr12:56,117,641–56,119,301 10.1 kb Distal (>10kb) Multiome 1052
chr12:56,119,404–56,119,678 8.6 kb Proximal (<10kb) 390
chr12:56,126,181–56,126,640 1.9 kb Proximal (<10kb) Multiome 671
chr12:56,127,552–56,129,104 150 bp At TSS Multiome 800
chr12:56,129,215–56,129,695 949 bp At TSS 487
chr12:56,151,724–56,153,003 24.2 kb Distal (>10kb) Multiome HiCAR 830
chr12:56,157,307–56,159,499 29.9 kb Distal (>10kb) Multiome HiCAR 1008
chr12:56,188,836–56,190,865 61.3 kb Distal (>10kb) Multiome HiCAR 954
chr12:56,221,094–56,222,691 93.7 kb Distal (>10kb) Multiome 884
chr12:56,222,996–56,223,487 94.9 kb Distal (>10kb) Multiome 38
chr12:56,223,843–56,224,800 96.0 kb Distal (>10kb) Multiome 765
chr12:56,257,471–56,258,774 130.2 kb Distal (>10kb) Multiome 710
chr12:56,266,608–56,267,683 138.8 kb Distal (>10kb) Multiome 857
chr12:56,299,744–56,300,865 172.2 kb Distal (>10kb) Multiome 923
chr12:56,315,380–56,316,674 187.9 kb Distal (>10kb) Multiome 934
chr12:56,333,366–56,334,588 205.7 kb Distal (>10kb) Multiome 853
chr12:56,359,808–56,360,881 232.0 kb Distal (>10kb) Multiome 860

Genome Browser

Genomic view of the ESYT1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr12:55,819,008 – 56,370,881
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq