This gene encodes a member of the epidermal growth factor receptor (EGFR) family of receptor tyrosine kinases. This membrane-bound protein has a neuregulin binding domain but not an active kinase domain. It therefore can bind this ligand but not convey the signal into the cell through protein phosphorylation. However, it does form heterodimers with other EGF receptor family members which do have kinase activity. Heterodimerization leads to the activation of pathways which lead to cell proliferation or differentiation. Amplification of this gene and/or overexpression of its protein have been reported in numerous cancers, including prostate, bladder, and breast tumors. Alternate transcriptional splice variants encoding different isoforms have been characterized. One isoform lacks the intermembrane region and is secreted outside the cell. This form acts to modulate the activity of the membrane-bound form. Additional splice variants have also been reported, but they have not been thoroughly characterized. [provided by RefSeq, Jul 2008]
Transcription factors with Perturb-seq knockdown data for ERBB3. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ERBB3 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ERBB3, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr12:55,817,254–55,818,558 | 262.2 kb | Distal (>10kb) Multiome | 749 | |
| chr12:55,829,008–55,831,505 | 250.5 kb | Distal (>10kb) Multiome | 921 | |
| chr12:55,926,651–55,928,471 | 153.1 kb | Distal (>10kb) Multiome | 993 | |
| chr12:55,931,904–55,932,439 | 148.0 kb | Distal (>10kb) Multiome | 279 | |
| chr12:55,940,073–55,940,746 | 139.7 kb | Distal (>10kb) Multiome | 478 | |
| chr12:55,966,006–55,967,470 | 113.4 kb | Distal (>10kb) Multiome | 615 | |
| chr12:55,973,347–55,974,716 | 106.3 kb | Distal (>10kb) Multiome | 966 | |
| chr12:55,996,814–55,997,861 | 82.9 kb | Distal (>10kb) Multiome | 680 | |
| chr12:56,006,888–56,008,461 | 72.5 kb | Distal (>10kb) Multiome | 745 | |
| chr12:56,020,644–56,021,511 | 59.2 kb | Distal (>10kb) Multiome | 364 | |
| chr12:56,041,220–56,042,537 | 38.3 kb | Distal (>10kb) Multiome | 1035 | |
| chr12:56,078,964–56,081,015 | 898 bp | At TSS Multiome | 1032 | |
| chr12:56,103,918–56,105,302 | 24.3 kb | Distal (>10kb) Multiome HiCAR | 977 | |
| chr12:56,115,844–56,117,060 | 36.4 kb | Distal (>10kb) Multiome | 958 | |
| chr12:56,117,641–56,119,301 | 38.1 kb | Distal (>10kb) Multiome | 1052 | |
| chr12:56,126,181–56,126,640 | 46.2 kb | Distal (>10kb) Multiome | 671 | |
| chr12:56,127,552–56,129,104 | 48.0 kb | Distal (>10kb) Multiome | 800 | |
| chr12:56,151,724–56,153,003 | 72.3 kb | Distal (>10kb) Multiome | 830 | |
| chr12:56,157,307–56,159,499 | 78.1 kb | Distal (>10kb) Multiome | 1008 | |
| chr12:56,188,836–56,190,865 | 109.5 kb | Distal (>10kb) Multiome | 954 | |
| chr12:56,221,094–56,222,691 | 141.8 kb | Distal (>10kb) Multiome | 884 | |
| chr12:56,222,996–56,223,487 | 143.0 kb | Distal (>10kb) Multiome | 38 | |
| chr12:56,223,843–56,224,800 | 144.2 kb | Distal (>10kb) Multiome | 765 | |
| chr12:56,257,471–56,258,774 | 178.3 kb | Distal (>10kb) Multiome | 710 | |
| chr12:56,266,608–56,267,683 | 186.9 kb | Distal (>10kb) Multiome | 857 | |
| chr12:56,299,744–56,300,865 | 220.3 kb | Distal (>10kb) Multiome | 923 | |
| chr12:56,315,380–56,316,674 | 236.0 kb | Distal (>10kb) Multiome | 934 | |
| chr12:56,333,366–56,334,588 | 253.8 kb | Distal (>10kb) Multiome | 853 | |
| chr12:56,359,808–56,360,881 | 280.2 kb | Distal (>10kb) Multiome | 860 |
Genomic view of the ERBB3 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.