ERBB3
erb-b2 receptor tyrosine kinase 3 | HER3, LCCS2

This gene encodes a member of the epidermal growth factor receptor (EGFR) family of receptor tyrosine kinases. This membrane-bound protein has a neuregulin binding domain but not an active kinase domain. It therefore can bind this ligand but not convey the signal into the cell through protein phosphorylation. However, it does form heterodimers with other EGF receptor family members which do have kinase activity. Heterodimerization leads to the activation of pathways which lead to cell proliferation or differentiation. Amplification of this gene and/or overexpression of its protein have been reported in numerous cancers, including prostate, bladder, and breast tumors. Alternate transcriptional splice variants encoding different isoforms have been characterized. One isoform lacks the intermembrane region and is secreted outside the cell. This form acts to modulate the activity of the membrane-bound form. Additional splice variants have also been reported, but they have not been thoroughly characterized. [provided by RefSeq, Jul 2008]

Biological processes 65 terms
ATP binding (GO:0005524)ERBB signaling pathway (GO:0038127)ERBB2-ERBB3 signaling pathway (GO:0038133)ERBB3:ERBB2 complex (GO:0038143)ErbB-3 class receptor binding (GO:0043125)Schwann cell development (GO:0014044)Schwann cell differentiation (GO:0014037)apical plasma membrane (GO:0016324)basal plasma membrane (GO:0009925)basolateral plasma membrane (GO:0016323)basolateral plasma membrane (GO:0016323)cell surface receptor protein tyrosine kinase signaling pathway (GO:0007169)cell surface receptor protein tyrosine kinase signaling pathway (GO:0007169)cell surface receptor protein tyrosine kinase signaling pathway (GO:0007169)cranial nerve development (GO:0021545)epidermal growth factor receptor signaling pathway (GO:0007173)extracellular region (GO:0005576)extracellular region (GO:0005576)extrinsic apoptotic signaling pathway in absence of ligand (GO:0097192)growth factor binding (GO:0019838)growth factor binding (GO:0019838)heart development (GO:0007507)identical protein binding (GO:0042802)lateral plasma membrane (GO:0016328)membrane (GO:0016020)myelination (GO:0042552)negative regulation of apoptotic process (GO:0043066)negative regulation of cell adhesion (GO:0007162)negative regulation of neuron apoptotic process (GO:0043524)negative regulation of secretion (GO:0051048)negative regulation of signal transduction (GO:0009968)neuregulin binding (GO:0038132)neuregulin binding (GO:0038132)neuregulin receptor activity (GO:0038131)neuregulin receptor activity (GO:0038131)neuromuscular junction development (GO:0007528)neuron apoptotic process (GO:0051402)neuron differentiation (GO:0030182)peripheral nervous system development (GO:0007422)phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0043491)plasma membrane (GO:0005886)plasma membrane (GO:0005886)plasma membrane (GO:0005886)plasma membrane (GO:0005886)plasma membrane (GO:0005886)positive regulation of JNK cascade (GO:0046330)positive regulation of MAPK cascade (GO:0043410)positive regulation of epithelial cell proliferation (GO:0050679)positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0051897)postsynaptic membrane (GO:0045211)protein binding (GO:0005515)protein heterodimerization activity (GO:0046982)protein kinase activity (GO:0004672)protein tyrosine kinase activator activity (GO:0030296)protein tyrosine kinase activity (GO:0004713)regulation of cell population proliferation (GO:0042127)signal transduction (GO:0007165)signaling receptor activity (GO:0038023)signaling receptor complex (GO:0043235)signaling receptor complex (GO:0043235)signaling receptor complex (GO:0043235)transmembrane signaling receptor activity (GO:0004888)transmembrane signaling receptor activity (GO:0004888)ubiquitin protein ligase binding (GO:0031625)wound healing (GO:0042060)
Expression (TPM)
ERBB3 — as a Regulated Gene

TFs regulating ERBB3 0 TFs

Transcription factors with Perturb-seq knockdown data for ERBB3. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ERBB3 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ERBB3

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ERBB3, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr12:55,817,254–55,818,558 262.2 kb Distal (>10kb) Multiome 749
chr12:55,829,008–55,831,505 250.5 kb Distal (>10kb) Multiome 921
chr12:55,926,651–55,928,471 153.1 kb Distal (>10kb) Multiome 993
chr12:55,931,904–55,932,439 148.0 kb Distal (>10kb) Multiome 279
chr12:55,940,073–55,940,746 139.7 kb Distal (>10kb) Multiome 478
chr12:55,966,006–55,967,470 113.4 kb Distal (>10kb) Multiome 615
chr12:55,973,347–55,974,716 106.3 kb Distal (>10kb) Multiome 966
chr12:55,996,814–55,997,861 82.9 kb Distal (>10kb) Multiome 680
chr12:56,006,888–56,008,461 72.5 kb Distal (>10kb) Multiome 745
chr12:56,020,644–56,021,511 59.2 kb Distal (>10kb) Multiome 364
chr12:56,041,220–56,042,537 38.3 kb Distal (>10kb) Multiome 1035
chr12:56,078,964–56,081,015 898 bp At TSS Multiome 1032
chr12:56,103,918–56,105,302 24.3 kb Distal (>10kb) Multiome HiCAR 977
chr12:56,115,844–56,117,060 36.4 kb Distal (>10kb) Multiome 958
chr12:56,117,641–56,119,301 38.1 kb Distal (>10kb) Multiome 1052
chr12:56,126,181–56,126,640 46.2 kb Distal (>10kb) Multiome 671
chr12:56,127,552–56,129,104 48.0 kb Distal (>10kb) Multiome 800
chr12:56,151,724–56,153,003 72.3 kb Distal (>10kb) Multiome 830
chr12:56,157,307–56,159,499 78.1 kb Distal (>10kb) Multiome 1008
chr12:56,188,836–56,190,865 109.5 kb Distal (>10kb) Multiome 954
chr12:56,221,094–56,222,691 141.8 kb Distal (>10kb) Multiome 884
chr12:56,222,996–56,223,487 143.0 kb Distal (>10kb) Multiome 38
chr12:56,223,843–56,224,800 144.2 kb Distal (>10kb) Multiome 765
chr12:56,257,471–56,258,774 178.3 kb Distal (>10kb) Multiome 710
chr12:56,266,608–56,267,683 186.9 kb Distal (>10kb) Multiome 857
chr12:56,299,744–56,300,865 220.3 kb Distal (>10kb) Multiome 923
chr12:56,315,380–56,316,674 236.0 kb Distal (>10kb) Multiome 934
chr12:56,333,366–56,334,588 253.8 kb Distal (>10kb) Multiome 853
chr12:56,359,808–56,360,881 280.2 kb Distal (>10kb) Multiome 860

Genome Browser

Genomic view of the ERBB3 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr12:55,807,254 – 56,370,881
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq