Transcription factors with Perturb-seq knockdown data for ENSG00000274565. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000274565 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000274565, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr17:62,617,005–62,618,105 | 9.5 kb | Proximal (<10kb) | 481 | |
| chr17:62,625,629–62,626,248 | 1.3 kb | Proximal (<10kb) | 60 | |
| chr17:62,626,684–62,628,608 | at TSS | At TSS | 557 | |
| chr17:62,628,899–62,629,683 | 1.3 kb | Proximal (<10kb) | 135 | |
| chr17:62,633,691–62,633,854 | 6.1 kb | Proximal (<10kb) | 102 |
Genomic view of the ENSG00000274565 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.