DNM1L
dynamin 1 like | DRP1, DVLP, DYMPLE, HDYNIV, VPS1

This gene encodes a member of the dynamin superfamily of GTPases. The encoded protein mediates mitochondrial and peroxisomal division, and is involved in developmentally regulated apoptosis and programmed necrosis. Dysfunction of this gene is implicated in several neurological disorders, including Alzheimer's disease. Mutations in this gene are associated with the autosomal dominant disorder, encephalopathy, lethal, due to defective mitochondrial and peroxisomal fission (EMPF). Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jun 2013]

Member of: DE-2
Biological processes 82 terms
GTP binding (GO:0005525)GTP-dependent protein binding (GO:0030742)GTPase activator activity (GO:0005096)GTPase activity (GO:0003924)GTPase activity (GO:0003924)GTPase activity (GO:0003924)Golgi apparatus (GO:0005794)Golgi apparatus (GO:0005794)brush border (GO:0005903)clathrin-coated pit (GO:0005905)cytoplasm (GO:0005737)cytoplasm (GO:0005737)cytoplasm (GO:0005737)cytosol (GO:0005829)cytosol (GO:0005829)cytosol (GO:0005829)cytosol (GO:0005829)endomembrane system (GO:0012505)endoplasmic reticulum (GO:0005783)endoplasmic reticulum (GO:0005783)endoplasmic reticulum membrane (GO:0005789)endoplasmic reticulum organization (GO:0007029)heart contraction (GO:0060047)identical protein binding (GO:0042802)identical protein binding (GO:0042802)intracellular distribution of mitochondria (GO:0048312)intracellular distribution of mitochondria (GO:0048312)intracellular distribution of mitochondria (GO:0048312)membrane (GO:0016020)membrane (GO:0016020)microtubule (GO:0005874)microtubule (GO:0005874)microtubule (GO:0005874)microtubule binding (GO:0008017)mitochondrial fission (GO:0000266)mitochondrial fission (GO:0000266)mitochondrial fission (GO:0000266)mitochondrial fission (GO:0000266)mitochondrial fragmentation involved in apoptotic process (GO:0043653)mitochondrial fragmentation involved in apoptotic process (GO:0043653)mitochondrial fragmentation involved in apoptotic process (GO:0043653)mitochondrial membrane fission (GO:0090149)mitochondrial membrane fission (GO:0090149)mitochondrial outer membrane (GO:0005741)mitochondrial outer membrane (GO:0005741)mitochondrial outer membrane (GO:0005741)mitochondrion (GO:0005739)mitochondrion (GO:0005739)mitochondrion (GO:0005739)mitochondrion (GO:0005739)mitochondrion (GO:0005739)mitochondrion organization (GO:0007005)mitochondrion organization (GO:0007005)mitochondrion-derived vesicle (GO:0099073)perinuclear region of cytoplasm (GO:0048471)perinuclear region of cytoplasm (GO:0048471)peroxisome (GO:0005777)peroxisome (GO:0005777)peroxisome (GO:0005777)peroxisome fission (GO:0016559)peroxisome fission (GO:0016559)peroxisome fission (GO:0016559)peroxisome fission (GO:0016559)positive regulation of mitochondrial fission (GO:0090141)positive regulation of mitochondrial fission (GO:0090141)positive regulation of mitochondrial fission (GO:0090141)positive regulation of neutrophil chemotaxis (GO:0090023)positive regulation of protein secretion (GO:0050714)positive regulation of secretion by cell (GO:1903532)protein binding (GO:0005515)protein complex oligomerization (GO:0051259)protein homodimerization activity (GO:0042803)protein homodimerization activity (GO:0042803)protein localization to mitochondrion (GO:0070585)protein-containing complex (GO:0032991)regulation of ATP metabolic process (GO:1903578)regulation of mitochondrion organization (GO:0010821)regulation of mitophagy (GO:1901524)regulation of peroxisome organization (GO:1900063)small GTPase binding (GO:0031267)synaptic vesicle membrane (GO:0030672)ubiquitin protein ligase binding (GO:0031625)
Expression (TPM)
DNM1L — as a Regulated Gene

TFs regulating DNM1L 0 TFs

Transcription factors with Perturb-seq knockdown data for DNM1L. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DNM1L upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DNM1L

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DNM1L, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr12:31,265,597–31,266,170 1413.3 kb Distal (>10kb) Multiome HiCAR 72
chr12:31,659,057–31,659,786 1020.0 kb Distal (>10kb) Multiome HiCAR 737
chr12:32,047,438–32,048,247 631.3 kb Distal (>10kb) Multiome HiCAR 272
chr12:32,398,922–32,400,774 279.7 kb Distal (>10kb) Multiome HiCAR 832
chr12:32,418,951–32,419,937 260.0 kb Distal (>10kb) Multiome 172
chr12:32,501,832–32,502,447 177.2 kb Distal (>10kb) Multiome 347
chr12:32,672,012–32,672,189 7.1 kb Proximal (<10kb) 215
chr12:32,678,963–32,680,020 10 bp At TSS Multiome 960
chr12:32,754,967–32,756,883 76.0 kb Distal (>10kb) Multiome 978
chr12:32,893,054–32,894,062 214.0 kb Distal (>10kb) Multiome 249
chr12:32,896,168–32,897,592 217.7 kb Distal (>10kb) Multiome 653

Genome Browser

Genomic view of the DNM1L locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr12:31,255,597 – 32,907,592
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq