DECR1
2,4-dienoyl-CoA reductase 1 | SDR18C1, DECR
DECR1 — as a Regulated Gene

TFs regulating DECR1 0 TFs

Transcription factors with Perturb-seq knockdown data for DECR1. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = DECR1 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to DECR1

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of DECR1, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr8:89,735,590–89,737,765 265.4 kb Distal (>10kb) Multiome 299
chr8:89,757,049–89,758,721 243.8 kb Distal (>10kb) Multiome 975
chr8:89,901,706–89,903,339 99.0 kb Distal (>10kb) Multiome 906
chr8:89,983,654–89,985,025 17.0 kb Distal (>10kb) Multiome 1128
chr8:89,992,539–89,993,861 8.5 kb Proximal (<10kb) Multiome 132
chr8:89,995,320–89,996,061 5.4 kb Proximal (<10kb) 189
chr8:90,000,653–90,002,462 145 bp At TSS Multiome 917
chr8:90,006,359–90,006,707 4.9 kb Proximal (<10kb) 15
chr8:90,081,366–90,083,237 81.4 kb Distal (>10kb) Multiome 562
chr8:90,203,329–90,204,017 202.2 kb Distal (>10kb) Multiome 129
chr8:90,644,726–90,647,850 644.7 kb Distal (>10kb) Multiome HiCAR 987
chr8:90,984,601–90,986,072 983.9 kb Distal (>10kb) Multiome HiCAR 606

Genome Browser

Genomic view of the DECR1 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr8:89,725,590 – 90,996,072
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq