ACHE
acetylcholinesterase (Yt blood group) | YT

Acetylcholinesterase hydrolyzes the neurotransmitter, acetylcholine at neuromuscular junctions and brain cholinergic synapses, and thus terminates signal transmission. It is also found on the red blood cell membranes, where it constitutes the Yt blood group antigen. Acetylcholinesterase exists in multiple molecular forms which possess similar catalytic properties, but differ in their oligomeric assembly and mode of cell attachment to the cell surface. It is encoded by the single ACHE gene, and the structural diversity in the gene products arises from alternative mRNA splicing, and post-translational associations of catalytic and structural subunits. The major form of acetylcholinesterase found in brain, muscle and other tissues is the hydrophilic species, which forms disulfide-linked oligomers with collagenous, or lipid-containing structural subunits. The other, alternatively spliced form, expressed primarily in the erythroid tissues, differs at the C-terminal end, and contains a cleavable hydrophobic peptide with a GPI-anchor site. It associates with the membranes through the phosphoinositide (PI) moieties added post-translationally. AChE activity may constitute a sensitive biomarker of RBC ageing in vivo, and thus, may be of aid in understanding the effects of transfusion[provided by RefSeq, Sep 2019]

Developmental clusters: GC2
Biological processes 49 terms
Golgi apparatus (GO:0005794)acetylcholine binding (GO:0042166)acetylcholine binding (GO:0042166)acetylcholine catabolic process (GO:0006581)acetylcholine catabolic process (GO:0006581)acetylcholine catabolic process (GO:0006581)acetylcholine catabolic process in synaptic cleft (GO:0001507)acetylcholinesterase activity (GO:0003990)acetylcholinesterase activity (GO:0003990)acetylcholinesterase activity (GO:0003990)acetylcholinesterase activity (GO:0003990)acetylcholinesterase activity (GO:0003990)amyloid precursor protein metabolic process (GO:0042982)amyloid-beta binding (GO:0001540)basement membrane (GO:0005604)basement membrane (GO:0005604)cell adhesion (GO:0007155)cell surface (GO:0009986)cholinesterase activity (GO:0004104)cholinesterase activity (GO:0004104)collagen binding (GO:0005518)extracellular region (GO:0005576)extracellular region (GO:0005576)extracellular region (GO:0005576)hydrolase activity (GO:0016787)identical protein binding (GO:0042802)laminin binding (GO:0043236)laminin binding (GO:0043236)membrane (GO:0016020)negative regulation of synaptic transmission, cholinergic (GO:0032223)nervous system development (GO:0007399)neuromuscular junction (GO:0031594)neuromuscular junction (GO:0031594)nucleus (GO:0005634)osteoblast development (GO:0002076)perinuclear region of cytoplasm (GO:0048471)plasma membrane (GO:0005886)plasma membrane (GO:0005886)positive regulation of cold-induced thermogenesis (GO:0120162)positive regulation of cold-induced thermogenesis (GO:0120162)positive regulation of protein secretion (GO:0050714)protein binding (GO:0005515)protein homodimerization activity (GO:0042803)serine hydrolase activity (GO:0017171)synapse (GO:0045202)synapse (GO:0045202)synapse (GO:0045202)synapse assembly (GO:0007416)synaptic cleft (GO:0043083)
Expression (TPM)
ACHE — as a Regulated Gene

TFs regulating ACHE 0 TFs

Transcription factors with Perturb-seq knockdown data for ACHE. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ACHE upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ACHE

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ACHE, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr7:100,611,685–100,612,981 283.6 kb Distal (>10kb) Multiome 767
chr7:100,626,427–100,627,057 269.1 kb Distal (>10kb) Multiome 415
chr7:100,656,111–100,656,626 239.5 kb Distal (>10kb) Multiome 653
chr7:100,673,043–100,674,892 222.4 kb Distal (>10kb) Multiome 934
chr7:100,674,996–100,676,406 220.0 kb Distal (>10kb) Multiome 439
chr7:100,691,570–100,692,163 204.0 kb Distal (>10kb) Multiome 364
chr7:100,693,475–100,694,667 201.6 kb Distal (>10kb) Multiome 607
chr7:100,705,140–100,706,426 190.0 kb Distal (>10kb) Multiome 962
chr7:100,827,001–100,828,324 68.2 kb Distal (>10kb) Multiome 794
chr7:100,835,906–100,837,766 59.1 kb Distal (>10kb) Multiome 766
chr7:100,852,057–100,853,190 43.4 kb Distal (>10kb) Multiome 805
chr7:100,874,652–100,875,664 20.9 kb Distal (>10kb) Multiome 1020
chr7:100,888,882–100,891,520 6.1 kb Proximal (<10kb) Multiome 1077
chr7:100,894,188–100,896,392 128 bp At TSS Multiome 609
chr7:100,896,481–100,897,567 1.2 kb Proximal (<10kb) Multiome 538
chr7:101,085,076–101,085,958 189.6 kb Distal (>10kb) Multiome 732
chr7:101,153,861–101,155,183 258.6 kb Distal (>10kb) Multiome 670
chr7:101,162,599–101,164,796 267.2 kb Distal (>10kb) Multiome 654
chr7:101,165,195–101,166,546 269.8 kb Distal (>10kb) Multiome 980

Genome Browser

Genomic view of the ACHE locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr7:100,601,685 – 101,176,546
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq