chr16 : 54,379,963 54,380,204
241 bp 5 TFs 1 linked gene
This 241 bp open chromatin element is linked to LINC02140 and is bound by GATA4, GATA6, SMAD2-3, SMAD2_3, and ZNF506.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02140 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:54,374,963 – 54,385,204
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
GATA4 3 datasets
ChIP DE DE-GATA4-1 241 bp overlap
ChIP DE DE-GATA4-2 241 bp overlap
ChIP foregut GSE117136.GATA4.foregut 241 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 241 bp overlap
ChIP DE DE-GATA6-2 241 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 241 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 241 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 241 bp overlap
ChIP foregut GSE117136.GATA6.foregut 241 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 222 bp overlap
ZNF506 1 dataset
ChIP HEK293T GSE78099.ZNF506.HEK293T 84 bp overlap