chr13 : 54,128,111 – 54,128,827
716 bp 5 TFs 1 linked gene
This 716 bp open chromatin element is linked to LINC00458 and is bound by FOXA1, FOXA2, GATA4, GATA6, and SOX17_M.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC00458 4.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:54,123,111 – 54,133,827
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
FOXA1 1 dataset
ChIP MCF-7 ENCFF465LTH 349 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 511 bp overlap
ChIP DE DE-FOXA2-2 580 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 419 bp overlap
ChIP DE DE-GATA4-2 450 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 444 bp overlap
ChIP DE DE-GATA6-2 463 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 224 bp overlap
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