chr13 : 37,876,085 – 37,876,246
161 bp 4 TFs 2 linked genes
This 161 bp open chromatin element is linked to ENSG00000287477 and TRPC4 and is bound by FOXA2, GATA4, GATA6, and SMAD2_3.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000287477 6.3 kb Proximal Proximity
TRPC4 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:37,871,085 – 37,881,246
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 161 bp overlap
ChIP DE DE-FOXA2-2 161 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 161 bp overlap
ChIP DE DE-GATA4-2 161 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 161 bp overlap
ChIP DE DE-GATA6-2 161 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 136 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 161 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 161 bp overlap
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