chr13 : 21,681,653 21,681,872
219 bp 4 TFs 1 linked gene
This 219 bp open chromatin element is linked to FGF9 and is bound by EOMES, NKX2-1, SMAD2-3, and SMAD2_3.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FGF9 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:21,676,653 – 21,686,872
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 177 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 56 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 219 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 219 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 219 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 219 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 219 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 219 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 219 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 219 bp overlap