chr12 : 14,570,356 14,570,554
198 bp 4 TFs 2 linked genes
This 198 bp open chromatin element is linked to PLBD1 and PLBD1-AS1 and is bound by CTNNB1, SMAD2, SMAD2-3, and SMAD2_3.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PLBD1 2.5 kb Proximal Proximity
PLBD1-AS1 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:14,565,356 – 14,575,554
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 182 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 198 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 198 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 198 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 191 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 198 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 198 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 198 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 198 bp overlap