chr11 : 6,386,681 6,386,953
272 bp 3 TFs 1 linked gene
This 272 bp open chromatin element is linked to SMPD1 and is bound by GATA6, SMAD2-3, and SMAD2_3.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SMPD1 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:6,381,681 – 6,391,953
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
3 transcription factors
Source
Cell type
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 272 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 272 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 269 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 264 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 272 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 272 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 272 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 272 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 272 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 272 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 263 bp overlap