chr1 : 186,903,452 – 186,903,667
215 bp 10 TFs 0 linked genes
This 215 bp open chromatin element has no linked target genes and is bound by 10 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:186,898,452 – 186,908,667
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
CTCF 19 datasets
ChIP GM13976 ENCFF896BYT 161 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 116 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 215 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 215 bp overlap
ChIP Peyer's patch ENCFF828IDE 215 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 215 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 215 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 215 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 214 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 215 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 215 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 215 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 213 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 68 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 215 bp overlap
ChIP stomach ENCFF719DAZ 215 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 106 bp overlap
ChIP upper lobe of left lung ENCFF374MAK 215 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 124 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 215 bp overlap
KLF12 1 dataset
ChIP HEK293 GSE76494.KLF12.HEK293 112 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 207 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 129 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 175 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 157 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 177 bp overlap
ZNF320 1 dataset
ChIP HEK293 GSE76494.ZNF320.HEK293 120 bp overlap
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