chr8 : 144,695,713 – 144,696,123
410 bp 8 TFs 2 linked genes
This 410 bp open chromatin element is linked to ENSG00000290885 and ARHGAP39 and is bound by 8 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000290885 4.5 kb Proximal Proximity
ARHGAP39 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:144,690,713 – 144,701,123
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 261 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 347 bp overlap
ChIP DE DE-FOXA2-2 410 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 382 bp overlap
ChIP DE DE-GATA4-2 410 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 339 bp overlap
ChIP DE DE-GATA6-2 410 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 406 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 410 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 410 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 410 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 284 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 268 bp overlap
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