chr8 : 111,241,965 – 111,242,131
166 bp 4 TFs 1 linked gene
This 166 bp open chromatin element is linked to LINC01609 and is bound by FOXA2, GATA4, GATA6, and SMAD2-3.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01609 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:111,236,965 – 111,247,131
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 166 bp overlap
ChIP DE DE-FOXA2-2 166 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 166 bp overlap
ChIP DE DE-GATA4-2 166 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 108 bp overlap
ChIP foregut GSE117136.GATA4.foregut 91 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 166 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 166 bp overlap
ChIP DE DE-GATA6-2 166 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 121 bp overlap
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