chr1 : 145,282,089 – 145,282,254
165 bp 3 TFs 3 linked genes
This 165 bp open chromatin element is linked to RNVU1-14, ENSG00000276216, and ENSG00000236140 and is bound by FOS, MXI1, and POLR2A.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RNVU1-14 974 bp At TSS Proximity
ENSG00000276216 974 bp At TSS Proximity
ENSG00000236140 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:145,277,089 – 145,287,254
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
3 transcription factors
Source
Cell type
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 116 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 165 bp overlap
POLR2A 2 datasets
ChIP Peyer's patch ENCFF990IYL 165 bp overlap
ChIP transverse colon ENCFF610RWV 165 bp overlap
Huangfu Lab · Publications · Resources · Contact