chr6 : 28,169,687 28,169,962
275 bp 7 TFs 2 linked genes
This 275 bp open chromatin element is linked to ENSG00000280107 and ZKSCAN8P1 and is bound by 7 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000280107 882 bp At TSS Proximity
ZKSCAN8P1 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:28,164,687 – 28,174,962
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
7 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 275 bp overlap
ChIP DE DE-FOXA2-2 275 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 275 bp overlap
ChIP DE DE-GATA4-2 275 bp overlap
ChIP foregut GSE117136.GATA4.foregut 238 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 223 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 275 bp overlap
ChIP DE DE-GATA6-2 275 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 275 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 275 bp overlap
ChIP foregut GSE117136.GATA6.foregut 237 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 275 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 275 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 275 bp overlap