chr4 : 154,778,766 154,779,173
407 bp 5 TFs 2 linked genes
This 407 bp open chromatin element is linked to RBM46 and ENSG00000249041 and is bound by CTCF, Cebpa, FOXA2, GATA4, and GATA6.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RBM46 2.1 kb Proximal Proximity
ENSG00000249041 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:154,773,766 – 154,784,173
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
CTCF 9 datasets
ChIP C4-2B ENCFF821XVN 58 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 101 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 198 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 111 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 120 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 125 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 112 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 213 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 119 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 226 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 204 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 214 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 166 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 235 bp overlap