chr4 : 104,498,072 104,498,557
485 bp 7 TFs 2 linked genes
This 485 bp open chromatin element is linked to CXXC4 and CXXC4-AS1 and is bound by 7 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CXXC4 3.2 kb Proximal Proximity
CXXC4-AS1 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:104,493,072 – 104,503,557
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
7 transcription factors
Source
Cell type
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 298 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 475 bp overlap
ChIP DE DE-GATA4-2 482 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 485 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 485 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 397 bp overlap
ChIP DE DE-GATA6-2 485 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 437 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 485 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 304 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 485 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 456 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 309 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 455 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 294 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 59 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 223 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 146 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 214 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 320 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 217 bp overlap