chr3 : 14,015,734 – 14,015,968
234 bp 4 TFs 1 linked gene
This 234 bp open chromatin element is linked to TPRXL and is bound by FOXA2, GATA4, GATA6, and SMAD2-3.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TPRXL 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:14,010,734 – 14,020,968
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 234 bp overlap
ChIP DE DE-FOXA2-2 234 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 234 bp overlap
ChIP DE DE-GATA4-2 234 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 234 bp overlap
ChIP DE DE-GATA6-2 234 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 234 bp overlap
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