chr1 : 47,019,176 47,019,652
476 bp 5 TFs 1 linked gene
This 476 bp open chromatin element is linked to CYP4X1 and is bound by FOXA2, GATA4, GATA6, SMAD2_3, and SMARCC1.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CYP4X1 4.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:47,014,176 – 47,024,652
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 317 bp overlap
ChIP DE DE-FOXA2-2 301 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 476 bp overlap
ChIP DE DE-GATA4-2 476 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 282 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 187 bp overlap
GATA6 12 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 72 bp overlap
ChIP DE DE-GATA6-1 476 bp overlap
ChIP DE DE-GATA6-2 476 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 476 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 476 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 476 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 476 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 117 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 283 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 476 bp overlap
ChIP foregut GSE117136.GATA6.foregut 270 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 278 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 386 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 249 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 336 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 255 bp overlap