chrY : 15,926,524 15,927,106
582 bp 12 TFs 0 linked genes
This 582 bp open chromatin element has no linked target genes and is bound by 12 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrY:15,921,524 – 15,932,106
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
ASCL1 2 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 184 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 204 bp overlap
FOXA1 4 datasets
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 243 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 582 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 80 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 122 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 582 bp overlap
ChIP DE DE-FOXA2-2 582 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 582 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 582 bp overlap
ChIP DE DE-GATA4-2 582 bp overlap
ChIP foregut GSE117136.GATA4.foregut 122 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 582 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 461 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 347 bp overlap
ChIP DE DE-GATA6-2 582 bp overlap
ChIP foregut GSE117136.GATA6.foregut 55 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 125 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 232 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 483 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 293 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 247 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 300 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 385 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 317 bp overlap
RARA 1 dataset
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 243 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 208 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 445 bp overlap