chrX : 144,215,023 – 144,215,317
294 bp 5 TFs 0 linked genes
This 294 bp open chromatin element has no linked target genes and is bound by DUX4, FOXA2, HMGA2, SOX17, and SOX17_M.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:144,210,023 – 144,220,317
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 174 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 265 bp overlap
ChIP DE DE-FOXA2-2 250 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 165 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 213 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 271 bp overlap
Huangfu Lab · Publications · Resources · Contact