TIMM29
translocase of inner mitochondrial membrane 29 | TIM29, C19orf52
TIMM29 — as a Regulated Gene

TFs regulating TIMM29 0 TFs

Transcription factors with Perturb-seq knockdown data for TIMM29. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = TIMM29 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to TIMM29

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of TIMM29, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr19:10,653,364–10,655,129 274.7 kb Distal (>10kb) Multiome 1086
chr19:10,695,264–10,696,403 232.9 kb Distal (>10kb) Multiome 831
chr19:10,701,273–10,702,291 227.3 kb Distal (>10kb) Multiome 889
chr19:10,717,121–10,718,717 211.0 kb Distal (>10kb) Multiome 849
chr19:10,835,171–10,836,835 92.9 kb Distal (>10kb) Multiome 1096
chr19:10,870,403–10,872,620 57.6 kb Distal (>10kb) Multiome 714
chr19:10,928,331–10,929,395 104 bp At TSS Multiome 860
chr19:10,936,699–10,936,966 7.9 kb Proximal (<10kb) 281
chr19:10,960,232–10,961,863 32.1 kb Distal (>10kb) Multiome 1016
chr19:11,089,041–11,091,015 160.5 kb Distal (>10kb) Multiome 964
chr19:11,137,551–11,138,233 209.1 kb Distal (>10kb) Multiome 584
chr19:11,155,520–11,156,298 227.1 kb Distal (>10kb) Multiome 754
chr19:11,196,759–11,198,184 268.9 kb Distal (>10kb) Multiome 728

Genome Browser

Genomic view of the TIMM29 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr19:10,643,364 – 11,208,184
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq