TERC
telomerase RNA component | SCARNA19, TER, TR, TRC3, hTR

Telomerase is a ribonucleoprotein polymerase that maintains telomere ends by addition of the telomere repeat TTAGGG. The enzyme consists of a protein component with reverse transcriptase activity, and an RNA component, encoded by this gene, that serves as a template for the telomere repeat. Telomerase expression plays a role in cellular senescence, as it is normally repressed in postnatal somatic cells resulting in progressive shortening of telomeres. Deregulation of telomerase expression in somatic cells may be involved in oncogenesis. Studies in mouse suggest that telomerase also participates in chromosomal repair, since de novo synthesis of telomere repeats may occur at double-stranded breaks. Mutations in this gene cause autosomal dominant dyskeratosis congenita, and may also be associated with some cases of aplastic anemia. [provided by RefSeq, Jul 2008]

Expression (TPM)
TERC — as a Regulated Gene

TFs regulating TERC 0 TFs

Transcription factors with Perturb-seq knockdown data for TERC. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = TERC upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to TERC

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of TERC, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr3:169,762,996–169,763,428 1.6 kb Proximal (<10kb) 459
chr3:169,764,381–169,765,564 at TSS At TSS 782
chr3:169,769,273–169,770,082 4.2 kb Proximal (<10kb) 566
chr3:169,771,800–169,773,839 6.7 kb Proximal (<10kb) 1077

Genome Browser

Genomic view of the TERC locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr3:169,752,996 – 169,783,839
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq