SLC35D3
solute carrier family 35 member D3 | FRCL1
SLC35D3 — as a Regulated Gene

TFs regulating SLC35D3 0 TFs

Transcription factors with Perturb-seq knockdown data for SLC35D3. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = SLC35D3 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to SLC35D3

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of SLC35D3, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr6:136,920,717–136,924,225 at TSS At TSS 498
chr6:136,927,369–136,927,635 5.1 kb Proximal (<10kb) 43

Genome Browser

Genomic view of the SLC35D3 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr6:136,910,717 – 136,937,635
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq