RGCC
regulator of cell cycle | RGC-32, RGC32, bA157L14.2, C13orf15

This gene is thought to regulate cell cycle progression. It is induced by p53 in response to DNA damage, or by sublytic levels of complement system proteins that result in activation of the cell cycle. The encoded protein localizes to the cytoplasm during interphase and to centrosomes during mitosis. The protein forms a complex with polo-like kinase 1. The protein also translocates to the nucleus in response to treatment with complement system proteins, and can associate with and increase the kinase activity of cell division cycle 2 protein. In different assays and cell types, overexpression of this protein has been shown to activate or suppress cell cycle progression. [provided by RefSeq, Jul 2008]

Biological processes 50 terms
R-SMAD binding (GO:0070412)cellular response to hypoxia (GO:0071456)centrosome (GO:0005813)centrosome (GO:0005813)complement receptor mediated signaling pathway (GO:0002430)cytoplasm (GO:0005737)cytoplasm (GO:0005737)cytoplasm (GO:0005737)cytosol (GO:0005829)fibroblast activation (GO:0072537)fibroblast activation (GO:0072537)kinase activator activity (GO:0019209)negative regulation of angiogenesis (GO:0016525)negative regulation of blood vessel endothelial cell migration (GO:0043537)negative regulation of cell population proliferation (GO:0008285)negative regulation of cell-cell adhesion mediated by cadherin (GO:2000048)negative regulation of cell-cell adhesion mediated by cadherin (GO:2000048)negative regulation of cytokine production (GO:0001818)negative regulation of endothelial cell proliferation (GO:0001937)negative regulation of exit from mitosis (GO:0001100)negative regulation of fibroblast growth factor production (GO:0090272)negative regulation of mitotic cell cycle phase transition (GO:1901991)nucleolus (GO:0005730)nucleoplasm (GO:0005654)nucleus (GO:0005634)nucleus (GO:0005634)phosphatidylinositol 3-kinase/protein kinase B signal transduction (GO:0043491)positive regulation of G1/S transition of mitotic cell cycle (GO:1900087)positive regulation of G1/S transition of mitotic cell cycle (GO:1900087)positive regulation of collagen biosynthetic process (GO:0032967)positive regulation of cytokine production (GO:0001819)positive regulation of endothelial cell apoptotic process (GO:2000353)positive regulation of epithelial to mesenchymal transition (GO:0010718)positive regulation of epithelial to mesenchymal transition (GO:0010718)positive regulation of extracellular matrix assembly (GO:1901203)positive regulation of extracellular matrix constituent secretion (GO:0003331)positive regulation of gene expression (GO:0010628)positive regulation of mitotic cell cycle (GO:0045931)positive regulation of stress fiber assembly (GO:0051496)positive regulation of transcription by RNA polymerase II (GO:0045944)positive regulation of vascular associated smooth muscle cell proliferation (GO:1904707)protein binding (GO:0005515)protein kinase activator activity (GO:0030295)protein kinase activator activity (GO:0030295)protein kinase binding (GO:0019901)protein kinase binding (GO:0019901)protein kinase binding (GO:0019901)protein kinase regulator activity (GO:0019887)regulation of cell cycle (GO:0051726)transforming growth factor beta receptor signaling pathway (GO:0007179)
Expression (TPM)
RGCC — as a Regulated Gene

TFs regulating RGCC 0 TFs

Transcription factors with Perturb-seq knockdown data for RGCC. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = RGCC upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to RGCC

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of RGCC, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr13:41,456,776–41,458,736 at TSS At TSS 626

Genome Browser

Genomic view of the RGCC locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr13:41,446,776 – 41,468,736
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq