PSME2
proteasome activator subunit 2 | PA28beta

The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. The immunoproteasome contains an alternate regulator, referred to as the 11S regulator or PA28, that replaces the 19S regulator. Three subunits (alpha, beta and gamma) of the 11S regulator have been identified. This gene encodes the beta subunit of the 11S regulator, one of the two 11S subunits that is induced by gamma-interferon. Three beta and three alpha subunits combine to form a heterohexameric ring. Six pseudogenes have been identified on chromosomes 4, 5, 8, 10 and 13. [provided by RefSeq, Jul 2008]

Member of: DE-1
Biological processes 20 terms
Expression (TPM)
PSME2 — as a Regulated Gene

TFs regulating PSME2 0 TFs

Transcription factors with Perturb-seq knockdown data for PSME2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = PSME2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to PSME2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of PSME2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr14:23,910,478–23,911,853 236.4 kb Distal (>10kb) Multiome 310
chr14:23,953,479–23,954,293 193.4 kb Distal (>10kb) Multiome 897
chr14:23,988,469–23,989,172 158.4 kb Distal (>10kb) Multiome 439
chr14:24,036,218–24,036,993 110.7 kb Distal (>10kb) Multiome 627
chr14:24,051,239–24,052,875 95.3 kb Distal (>10kb) Multiome 821
chr14:24,080,914–24,082,038 65.8 kb Distal (>10kb) Multiome 706
chr14:24,093,491–24,095,115 53.0 kb Distal (>10kb) Multiome 990
chr14:24,113,681–24,115,917 32.3 kb Distal (>10kb) Multiome 1166
chr14:24,135,549–24,136,884 11.2 kb Distal (>10kb) Multiome 778
chr14:24,140,526–24,142,331 5.6 kb Proximal (<10kb) Multiome 1034
chr14:24,146,204–24,148,108 448 bp At TSS Multiome 918
chr14:24,160,877–24,161,762 14.0 kb Distal (>10kb) Multiome 970
chr14:24,171,489–24,172,698 24.6 kb Distal (>10kb) Multiome 365
chr14:24,188,229–24,189,111 41.6 kb Distal (>10kb) Multiome 1074
chr14:24,195,072–24,196,365 48.3 kb Distal (>10kb) Multiome 1059
chr14:24,212,871–24,213,884 66.2 kb Distal (>10kb) Multiome 1036
chr14:24,215,523–24,216,241 68.8 kb Distal (>10kb) Multiome 955
chr14:24,231,706–24,233,147 85.3 kb Distal (>10kb) Multiome 1027
chr14:24,241,845–24,243,572 95.3 kb Distal (>10kb) Multiome 1077
chr14:24,270,770–24,271,924 124.2 kb Distal (>10kb) Multiome 1089
chr14:24,299,120–24,300,273 152.5 kb Distal (>10kb) Multiome 892
chr14:24,315,948–24,316,753 169.1 kb Distal (>10kb) Multiome 736
chr14:24,332,251–24,333,127 185.3 kb Distal (>10kb) Multiome 740
chr14:24,365,652–24,366,243 218.5 kb Distal (>10kb) Multiome 668
chr14:24,366,594–24,369,358 219.9 kb Distal (>10kb) Multiome 921
chr14:24,388,547–24,389,510 241.7 kb Distal (>10kb) Multiome 161
chr14:24,398,424–24,399,423 251.7 kb Distal (>10kb) Multiome 354
chr14:24,429,597–24,431,070 282.8 kb Distal (>10kb) Multiome 903
chr14:24,431,554–24,432,205 284.7 kb Distal (>10kb) Multiome 604
chr14:24,441,935–24,443,373 295.4 kb Distal (>10kb) Multiome 1072

Genome Browser

Genomic view of the PSME2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr14:23,900,478 – 24,453,373
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq