Predicted to enable phosphatidic acid transfer activity. Predicted to be involved in phospholipid transport. Located in mitochondrion. [provided by Alliance of Genome Resources, Jul 2025]
Transcription factors with Perturb-seq knockdown data for PRELID3B. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = PRELID3B upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of PRELID3B, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr20:58,850,471–58,851,960 | 191.8 kb | Distal (>10kb) Multiome | 308 | |
| chr20:58,852,406–58,852,990 | 190.0 kb | Distal (>10kb) Multiome | 172 | |
| chr20:58,888,196–58,892,842 | 153.8 kb | Distal (>10kb) Multiome | 977 | |
| chr20:58,980,774–58,981,785 | 61.5 kb | Distal (>10kb) Multiome | 797 | |
| chr20:59,006,785–59,007,608 | 35.6 kb | Distal (>10kb) Multiome | 401 | |
| chr20:59,031,825–59,033,029 | 10.3 kb | Distal (>10kb) Multiome | 1108 | |
| chr20:59,042,196–59,043,527 | 81 bp | At TSS Multiome | 834 | |
| chr20:59,222,192–59,223,002 | 179.9 kb | Distal (>10kb) Multiome | 395 | |
| chr20:59,331,250–59,332,288 | 289.1 kb | Distal (>10kb) Multiome | 134 |
Genomic view of the PRELID3B locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.