NAXD
NAD(P)HX dehydratase | FLJ10769, LP3298, CARKD
NAXD — as a Regulated Gene

TFs regulating NAXD 0 TFs

Transcription factors with Perturb-seq knockdown data for NAXD. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = NAXD upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to NAXD

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of NAXD, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr13:110,485,584–110,487,244 129.0 kb Distal (>10kb) Multiome 272
chr13:110,540,846–110,542,010 74.2 kb Distal (>10kb) Multiome 268
chr13:110,561,007–110,562,237 53.9 kb Distal (>10kb) Multiome 710
chr13:110,615,145–110,616,475 15 bp At TSS Multiome 792
chr13:110,644,706–110,645,508 29.5 kb Distal (>10kb) Multiome 290
chr13:110,705,702–110,706,922 90.7 kb Distal (>10kb) Multiome 770
chr13:110,712,027–110,716,477 100.0 kb Distal (>10kb) Multiome 1162
chr13:110,812,187–110,813,068 197.1 kb Distal (>10kb) Multiome 129
chr13:110,914,077–110,916,083 299.7 kb Distal (>10kb) Multiome 897

Genome Browser

Genomic view of the NAXD locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr13:110,475,584 – 110,926,083
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq