MMAA
metabolism of cobalamin associated A | cblA
MMAA — as a Regulated Gene

TFs regulating MMAA 0 TFs

Transcription factors with Perturb-seq knockdown data for MMAA. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = MMAA upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to MMAA

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of MMAA, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr4:145,179,427–145,181,239 438.7 kb Distal (>10kb) Multiome HiCAR 855
chr4:145,481,315–145,483,013 137.5 kb Distal (>10kb) Multiome 700
chr4:145,609,903–145,610,090 9.3 kb Proximal (<10kb) 121
chr4:145,618,861–145,619,971 17 bp At TSS Multiome 997
chr4:145,624,298–145,624,572 4.9 kb Proximal (<10kb) 19
chr4:145,703,274–145,705,032 84.7 kb Distal (>10kb) Multiome 271
chr4:145,732,348–145,733,906 113.8 kb Distal (>10kb) Multiome 591
chr4:145,887,216–145,887,983 268.1 kb Distal (>10kb) Multiome HiCAR 199
chr4:145,909,209–145,909,939 290.2 kb Distal (>10kb) Multiome 176
chr4:146,243,313–146,244,097 624.3 kb Distal (>10kb) Multiome HiCAR 248

Genome Browser

Genomic view of the MMAA locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr4:145,169,427 – 146,254,097
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq