LRRC26
leucine rich repeat containing 26 | OTTHUMG00000020980, bA350O14.10
LRRC26 — as a Regulated Gene

TFs regulating LRRC26 0 TFs

Transcription factors with Perturb-seq knockdown data for LRRC26. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = LRRC26 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to LRRC26

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of LRRC26, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr9:136,885,976–136,887,547 283.7 kb Distal (>10kb) Multiome 770
chr9:136,943,250–136,945,621 225.4 kb Distal (>10kb) Multiome 883
chr9:136,949,631–136,950,846 219.9 kb Distal (>10kb) Multiome 776
chr9:136,977,106–136,980,430 191.5 kb Distal (>10kb) Multiome 413
chr9:136,991,827–136,993,248 177.7 kb Distal (>10kb) Multiome 720
chr9:137,027,536–137,029,054 141.8 kb Distal (>10kb) Multiome 539
chr9:137,045,334–137,046,838 123.6 kb Distal (>10kb) Multiome 829
chr9:137,053,352–137,054,892 115.9 kb Distal (>10kb) Multiome 544
chr9:137,067,810–137,068,494 101.9 kb Distal (>10kb) Multiome HiCAR 492
chr9:137,069,879–137,071,138 99.3 kb Distal (>10kb) Multiome 703
chr9:137,076,758–137,078,723 92.7 kb Distal (>10kb) Multiome 530
chr9:137,085,844–137,087,716 83.2 kb Distal (>10kb) Multiome HiCAR 890
chr9:137,129,244–137,130,499 40.2 kb Distal (>10kb) Multiome 823
chr9:137,167,984–137,170,155 1.9 kb Proximal (<10kb) Multiome 560
chr9:137,188,099–137,189,538 18.7 kb Distal (>10kb) Multiome HiCAR 954
chr9:137,200,175–137,201,689 30.8 kb Distal (>10kb) Multiome HiCAR 856
chr9:137,205,371–137,205,975 35.6 kb Distal (>10kb) Multiome HiCAR 758
chr9:137,221,373–137,224,294 53.5 kb Distal (>10kb) Multiome HiCAR 843
chr9:137,236,161–137,237,143 66.7 kb Distal (>10kb) Multiome HiCAR 748
chr9:137,239,991–137,242,933 71.0 kb Distal (>10kb) Multiome 1117
chr9:137,253,801–137,256,036 85.2 kb Distal (>10kb) Multiome 843
chr9:137,280,593–137,281,861 111.2 kb Distal (>10kb) Multiome 223
chr9:137,294,859–137,296,916 125.6 kb Distal (>10kb) Multiome 501
chr9:137,300,591–137,303,141 132.4 kb Distal (>10kb) Multiome 790
chr9:137,316,104–137,316,916 146.4 kb Distal (>10kb) Multiome 395
chr9:137,406,843–137,407,556 237.1 kb Distal (>10kb) Multiome 427
chr9:137,422,664–137,424,024 253.2 kb Distal (>10kb) Multiome 896
chr9:137,441,270–137,441,970 271.6 kb Distal (>10kb) Multiome 568
chr9:137,453,153–137,455,543 284.0 kb Distal (>10kb) Multiome 727
chr9:137,458,468–137,459,887 289.3 kb Distal (>10kb) Multiome 613
chr9:137,461,555–137,462,160 291.8 kb Distal (>10kb) Multiome 284

Genome Browser

Genomic view of the LRRC26 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr9:136,875,976 – 137,472,160
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq