IL15
interleukin 15 | IL-15, MGC9721

The protein encoded by this gene is a cytokine that regulates T and natural killer cell activation and proliferation. This cytokine and interleukine 2 share many biological activities. They are found to bind common hematopoietin receptor subunits, and may compete for the same receptor, and thus negatively regulate each other's activity. The number of CD8+ memory cells is shown to be controlled by a balance between this cytokine and IL2. This cytokine induces the activation of JAK kinases, as well as the phosphorylation and activation of transcription activators STAT3, STAT5, and STAT6. Studies of the mouse counterpart suggested that this cytokine may increase the expression of apoptosis inhibitor BCL2L1/BCL-x(L), possibly through the transcription activation activity of STAT6, and thus prevent apoptosis. Alternatively spliced transcript variants of this gene have been reported. [provided by RefSeq, Feb 2011]

Biological processes 42 terms
Golgi apparatus (GO:0005794)cell surface receptor signaling pathway via JAK-STAT (GO:0007259)cell-cell signaling (GO:0007267)cytokine activity (GO:0005125)cytokine activity (GO:0005125)cytokine activity (GO:0005125)cytokine receptor binding (GO:0005126)cytoplasm (GO:0005737)cytoplasm (GO:0005737)endosome (GO:0005768)extracellular region (GO:0005576)extracellular region (GO:0005576)extracellular region (GO:0005576)extracellular region (GO:0005576)extracellular region (GO:0005576)immune response (GO:0006955)immune response (GO:0006955)interleukin-15-mediated signaling pathway (GO:0035723)interleukin-15-mediated signaling pathway (GO:0035723)macrophage differentiation (GO:0030225)negative regulation of apoptotic process (GO:0043066)negative regulation of cold-induced thermogenesis (GO:0120163)negative regulation of cold-induced thermogenesis (GO:0120163)neutrophil activation (GO:0042119)neutrophil activation (GO:0042119)nuclear speck (GO:0016607)nucleoplasm (GO:0005654)nucleus (GO:0005634)positive regulation of MAPK cascade (GO:0043410)positive regulation of T cell proliferation (GO:0042102)positive regulation of cell population proliferation (GO:0008284)positive regulation of cell population proliferation (GO:0008284)positive regulation of cytokine production (GO:0001819)positive regulation of immune response (GO:0050778)positive regulation of inflammatory response (GO:0050729)positive regulation of interleukin-17 production (GO:0032740)positive regulation of peptidyl-tyrosine phosphorylation (GO:0050731)positive regulation of phagocytosis (GO:0050766)positive regulation of tissue remodeling (GO:0034105)protein binding (GO:0005515)signal transduction (GO:0007165)tyrosine phosphorylation of STAT protein (GO:0007260)
Expression (TPM)
IL15 — as a Regulated Gene

TFs regulating IL15 0 TFs

Transcription factors with Perturb-seq knockdown data for IL15. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = IL15 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to IL15

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of IL15, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr4:141,632,780–141,633,179 3.4 kb Proximal (<10kb) 4
chr4:141,633,354–141,633,771 2.8 kb Proximal (<10kb) 10
chr4:141,635,835–141,637,473 163 bp At TSS Multiome 619

Genome Browser

Genomic view of the IL15 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr4:141,622,780 – 141,647,473
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq